Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AC063952.2-201ENST00000498792 1227 ntBASIC15.31■□□□□ 0.04
GAFA1Q96PS6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AC022616.7-201ENST00000525383 220 ntBASIC15.31■□□□□ 0.04
GAFA1Q96PS6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 PVRIG2P-201ENST00000435460 978 ntBASIC15.3■□□□□ 0.04
GAFA1Q96PS6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GAFA1Q96PS6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.29■□□□□ 0.04
GAFA1Q96PS6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 GMCL1P1-201ENST00000463439 1581 ntBASIC15.29■□□□□ 0.04
GAFA1Q96PS6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 FAM8A6P-201ENST00000407496 1135 ntBASIC15.29■□□□□ 0.04
GAFA1Q96PS6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 AC079602.3-201ENST00000623931 403 ntBASIC15.29■□□□□ 0.04
GAFA1Q96PS6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.29■□□□□ 0.04
GAFA1Q96PS6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms