Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 MIR935-201ENST00000401179 91 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 AC093787.1-201ENST00000450396 207 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 RAP2CP1-201ENST00000605103 478 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 HLA-A-209ENST00000638375 975 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 AL596257.1-201ENST00000641463 2694 ntBASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM2Q96JY6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 AC006557.6-201ENST00000623071 864 ntBASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM2Q96JY6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM2Q96JY6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM2Q96JY6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDLIM2Q96JY6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms