Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 HLA-F-220ENST00000434407 884 ntBASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 KRT18P38-201ENST00000449496 1282 ntBASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 DUX4L26-201ENST00000489078 1255 ntBASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTHRC1Q96CG8 AL391807.1-203ENST00000604392 2365 ntBASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 HYMAI.1-201ENST00000620949 238 ntBASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 AL390961.4-201ENST00000623958 2535 ntBASIC17.04■□□□□ 0.32
CTHRC1Q96CG8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 AC022616.7-201ENST00000525383 220 ntBASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 AL136038.4-201ENST00000603606 1261 ntBASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTHRC1Q96CG8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTHRC1Q96CG8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms