Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
USP13Q92995 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
USP13Q92995 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.26■□□□□ 0.67
USP13Q92995 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
USP13Q92995 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 AC138932.1-201ENST00000534164 6830 ntBASIC19.26■□□□□ 0.67
USP13Q92995 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.26■□□□□ 0.67
USP13Q92995 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.26■□□□□ 0.67
USP13Q92995 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
USP13Q92995 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.26■□□□□ 0.67
USP13Q92995 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
USP13Q92995 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP13Q92995 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP13Q92995 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.25■□□□□ 0.67
USP13Q92995 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.25■□□□□ 0.67
USP13Q92995 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.25■□□□□ 0.67
USP13Q92995 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.25■□□□□ 0.67
USP13Q92995 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 PVRIG2P-201ENST00000435460 978 ntBASIC19.25■□□□□ 0.67
USP13Q92995 TPM4P1-201ENST00000436100 807 ntBASIC19.25■□□□□ 0.67
USP13Q92995 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.25■□□□□ 0.67
USP13Q92995 PRELID1P1-202ENST00000567272 903 ntBASIC19.25■□□□□ 0.67
USP13Q92995 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 AL691432.3-201ENST00000621860 400 ntBASIC19.25■□□□□ 0.67
USP13Q92995 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.25■□□□□ 0.67
USP13Q92995 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP13Q92995 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.25■□□□□ 0.67
USP13Q92995 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.24■□□□□ 0.67
USP13Q92995 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.24■□□□□ 0.67
USP13Q92995 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
USP13Q92995 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
USP13Q92995 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP13Q92995 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 AC026396.1-201ENST00000419388 421 ntBASIC19.24■□□□□ 0.67
USP13Q92995 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.24■□□□□ 0.67
USP13Q92995 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.24■□□□□ 0.67
USP13Q92995 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.24■□□□□ 0.67
USP13Q92995 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP13Q92995 MIR3180-4-201ENST00000582223 153 ntBASIC19.24■□□□□ 0.67
USP13Q92995 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
USP13Q92995 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.24■□□□□ 0.67
USP13Q92995 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP13Q92995 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.24■□□□□ 0.67
USP13Q92995 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP13Q92995 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms