Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 AC010653.2-201ENST00000623505 997 ntBASIC18.87■□□□□ 0.61
SCG3Q8WXD2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCG3Q8WXD2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 LINC01238-205ENST00000567549 1107 ntBASIC18.86■□□□□ 0.61
SCG3Q8WXD2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FAM87A-204ENST00000613235 858 ntBASIC18.86■□□□□ 0.61
SCG3Q8WXD2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 AL512353.2-201ENST00000448759 1962 ntBASIC18.86■□□□□ 0.61
SCG3Q8WXD2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCG3Q8WXD2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCG3Q8WXD2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 AC104076.2-201ENST00000448912 469 ntBASIC18.84■□□□□ 0.61
SCG3Q8WXD2 CA15P1-201ENST00000481698 905 ntBASIC18.84■□□□□ 0.61
SCG3Q8WXD2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms