Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 Z69720.1-201ENST00000601483 472 ntBASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 AC099336.1-202ENST00000602961 463 ntBASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 AC246785.2-201ENST00000432512 513 ntBASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 KRT18P31-201ENST00000506277 1292 ntBASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 AC113404.2-201ENST00000507884 177 ntBASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 AC091304.2-201ENST00000564639 760 ntBASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SH3RF3Q8TEJ3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 EMBP1-201ENST00000458200 901 ntBASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 AL121772.3-201ENST00000610840 674 ntBASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 NSUN5P1-202ENST00000421140 1535 ntBASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 NSUN5P2-203ENST00000457352 1529 ntBASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF3Q8TEJ3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF3Q8TEJ3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms