Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 AP000593.1-201ENST00000393668 712 ntBASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 SLC25A1P2-201ENST00000430693 912 ntBASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 KRT18P41-201ENST00000518924 1277 ntBASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAF3IP1Q8TDR0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 MIR1238-201ENST00000408483 83 ntBASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 AL354751.1-201ENST00000412768 1863 ntBASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 AL390955.1-201ENST00000428694 934 ntBASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 CCR12P-201ENST00000446203 998 ntBASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 TSPY17P-201ENST00000450329 467 ntBASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 AL162741.1-201ENST00000565563 1558 ntBASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAF3IP1Q8TDR0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
TRAF3IP1Q8TDR0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 AC036111.1-201ENST00000533973 1582 ntBASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 FITM1-202ENST00000559294 800 ntBASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAF3IP1Q8TDR0 ABALON-201ENST00000629058 1903 ntBASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 AP003041.3-201ENST00000527151 707 ntBASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 MIR4674-201ENST00000582457 87 ntBASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms