Protein–RNA interactions for Protein: Q8TDC3

BRSK1, Serine/threonine-protein kinase BRSK1, humanhuman

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRSK1Q8TDC3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRSK1Q8TDC3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRSK1Q8TDC3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRSK1Q8TDC3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 COX11P1-201ENST00000489116 835 ntBASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 AC140113.3-201ENST00000605663 199 ntBASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRSK1Q8TDC3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 TMPOP1-202ENST00000424642 1267 ntBASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 KRT18P57-201ENST00000443599 1254 ntBASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 KRT18P21-201ENST00000515767 1272 ntBASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
BRSK1Q8TDC3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
BRSK1Q8TDC3 AL354751.1-201ENST00000412768 1863 ntBASIC18.46■□□□□ 0.54
BRSK1Q8TDC3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AC135776.1-201ENST00000319817 2481 ntBASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 RN7SL850P-201ENST00000579959 291 ntBASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AC093677.2-201ENST00000600169 1863 ntBASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 ESPNP-201ENST00000270691 2015 ntBASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 AC099343.3-201ENST00000605834 2503 ntBASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRSK1Q8TDC3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms