Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 HBZP1-201ENST00000354915 429 ntBASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 AL645929.1-201ENST00000420084 975 ntBASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-3Q8TAU0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.77■■□□□ 1.07
NKX2-3Q8TAU0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 TSSC2-201ENST00000450217 709 ntBASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-3Q8TAU0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 KRT8P7-201ENST00000533003 1432 ntBASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 AL121672.3-201ENST00000608644 468 ntBASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 AL391807.1-203ENST00000604392 2365 ntBASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.75■■□□□ 1.07
NKX2-3Q8TAU0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 HLA-F-220ENST00000434407 884 ntBASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 BX276092.5-203ENST00000456199 560 ntBASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-3Q8TAU0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms