Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 FAM220CP-201ENST00000395253 831 ntBASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 SART3-203ENST00000546611 1184 ntBASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHDC9Q8NEP7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.27■□□□□ 0.83
KLHDC9Q8NEP7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
KLHDC9Q8NEP7 AL032819.2-201ENST00000624543 2162 ntBASIC20.27■□□□□ 0.83
KLHDC9Q8NEP7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 AC005104.2-201ENST00000427818 678 ntBASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 ABCD1P5-201ENST00000445663 754 ntBASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 AC083906.6-201ENST00000641366 219 ntBASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KLHDC9Q8NEP7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHDC9Q8NEP7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 RPS2P1-201ENST00000434010 821 ntBASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 AC104109.2-201ENST00000602919 1418 ntBASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHDC9Q8NEP7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KLHDC9Q8NEP7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms