Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 AL358472.4-201ENST00000633140 710 ntBASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 AL162741.1-201ENST00000565563 1558 ntBASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 ESPNP-201ENST00000270691 2015 ntBASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC01555Q8NAE3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 AL645929.1-201ENST00000420084 975 ntBASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01555Q8NAE3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 PCED1CP-201ENST00000419887 785 ntBASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 AC024563.2-201ENST00000603282 481 ntBASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 AIRN-201ENST00000601203 4374 ntBASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LINC01555Q8NAE3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01555Q8NAE3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms