Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.55■□□□□ 0.72
TTC39CQ8N584 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 AL359075.1-203ENST00000462729 1002 ntBASIC19.55■□□□□ 0.72
TTC39CQ8N584 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC39CQ8N584 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.55■□□□□ 0.72
TTC39CQ8N584 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 AC112907.2-201ENST00000448639 330 ntBASIC19.54■□□□□ 0.72
TTC39CQ8N584 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TTC39CQ8N584 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TTC39CQ8N584 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 HBZP1-201ENST00000354915 429 ntBASIC19.53■□□□□ 0.72
TTC39CQ8N584 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 KRT18P38-201ENST00000449496 1282 ntBASIC19.53■□□□□ 0.72
TTC39CQ8N584 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 AC024563.2-201ENST00000603282 481 ntBASIC19.53■□□□□ 0.72
TTC39CQ8N584 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TTC39CQ8N584 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.53■□□□□ 0.72
TTC39CQ8N584 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 AL671277.2-201ENST00000458060 996 ntBASIC19.52■□□□□ 0.72
TTC39CQ8N584 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 HYMAI.1-201ENST00000620949 238 ntBASIC19.52■□□□□ 0.72
TTC39CQ8N584 AC079602.3-201ENST00000623931 403 ntBASIC19.52■□□□□ 0.72
TTC39CQ8N584 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TTC39CQ8N584 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.52■□□□□ 0.72
TTC39CQ8N584 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TTC39CQ8N584 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TTC39CQ8N584 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TTC39CQ8N584 AL024508.2-201ENST00000607749 1894 ntBASIC19.52■□□□□ 0.71
TTC39CQ8N584 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.52■□□□□ 0.71
TTC39CQ8N584 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 LINC01311-201ENST00000565162 1445 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms