Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHTF2Q8N3S3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHTF2Q8N3S3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHTF2Q8N3S3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 BX276092.5-203ENST00000456199 560 ntBASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 KRT8P26-201ENST00000534154 1276 ntBASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 AC092329.2-201ENST00000598402 547 ntBASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHTF2Q8N3S3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 AC009113.1-201ENST00000570267 2443 ntBASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHTF2Q8N3S3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 AL161938.1-201ENST00000569833 2180 ntBASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 RNF126P1-202ENST00000569893 925 ntBASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHTF2Q8N3S3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 AC005332.8-201ENST00000622750 2735 ntBASIC19■□□□□ 0.63
PHTF2Q8N3S3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 AC068587.9-201ENST00000641814 219 ntBASIC19■□□□□ 0.63
PHTF2Q8N3S3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PHTF2Q8N3S3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHTF2Q8N3S3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHTF2Q8N3S3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms