Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC28.67■■■□□ 2.18
VPS8Q8N3P4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.66■■■□□ 2.18
VPS8Q8N3P4 ANKRD20A8P-203ENST00000641373 517 ntBASIC28.66■■■□□ 2.18
VPS8Q8N3P4 AC233702.3-201ENST00000578656 1387 ntBASIC28.66■■■□□ 2.18
VPS8Q8N3P4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 PHGDH-209ENST00000641074 1780 ntBASIC28.65■■■□□ 2.18
VPS8Q8N3P4 AC087289.5-201ENST00000586076 3175 ntBASIC28.65■■■□□ 2.18
VPS8Q8N3P4 AC246785.2-201ENST00000432512 513 ntBASIC28.65■■■□□ 2.18
VPS8Q8N3P4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 AC092329.2-201ENST00000598402 547 ntBASIC28.65■■■□□ 2.18
VPS8Q8N3P4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
VPS8Q8N3P4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 AC005336.2-201ENST00000593183 939 ntBASIC28.64■■■□□ 2.18
VPS8Q8N3P4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC28.64■■■□□ 2.18
VPS8Q8N3P4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC28.64■■■□□ 2.17
VPS8Q8N3P4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.17
VPS8Q8N3P4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 LINC00265-3P-201ENST00000447588 903 ntBASIC28.63■■■□□ 2.17
VPS8Q8N3P4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 AC012615.1-201ENST00000565797 1299 ntBASIC28.63■■■□□ 2.17
VPS8Q8N3P4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
VPS8Q8N3P4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.62■■■□□ 2.17
VPS8Q8N3P4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 LINC00602-201ENST00000629776 2065 ntBASIC28.62■■■□□ 2.17
VPS8Q8N3P4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS8Q8N3P4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 AC009154.2-201ENST00000621177 724 ntBASIC28.61■■■□□ 2.17
VPS8Q8N3P4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 AC093677.2-201ENST00000600169 1863 ntBASIC28.61■■■□□ 2.17
VPS8Q8N3P4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC28.61■■■□□ 2.17
VPS8Q8N3P4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
VPS8Q8N3P4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
VPS8Q8N3P4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms