Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 FAM86EP-206ENST00000510506 987 ntBASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 AC009065.1-201ENST00000564055 1225 ntBASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
TRIM48Q8IWZ4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 AC092597.1-201ENST00000487352 616 ntBASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM48Q8IWZ4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AC005332.1-201ENST00000577698 1310 ntBASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 HBZP1-201ENST00000354915 429 ntBASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AL136038.3-201ENST00000561909 1096 ntBASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 HYMAI.1-201ENST00000620949 238 ntBASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms