Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AP001160.2-201ENST00000596071 487 ntBASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AC125437.2-201ENST00000625180 2167 ntBASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AKR1C7P-201ENST00000305623 895 ntBASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AL591684.3-201ENST00000605187 298 ntBASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RP1L1Q8IWN7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 AC145285.3-201ENST00000564603 959 ntBASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 AC024563.2-201ENST00000603282 481 ntBASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 AC010240.3-201ENST00000607688 395 ntBASIC16.64■□□□□ 0.26
RP1L1Q8IWN7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 KRT8P7-201ENST00000533003 1432 ntBASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.64■□□□□ 0.25
RP1L1Q8IWN7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms