Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LINC00346Q8IVM7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AC026471.1-201ENST00000564629 3026 ntBASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 UNC93B2-201ENST00000285383 730 ntBASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AP005242.2-201ENST00000580065 1175 ntBASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AP000525.1-201ENST00000608286 694 ntBASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00346Q8IVM7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 AC034236.2-201ENST00000606662 1610 ntBASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 SNORA78-201ENST00000459373 127 ntBASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 MIR4785-201ENST00000585005 73 ntBASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC00346Q8IVM7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 KRT18P41-201ENST00000518924 1277 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms