Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF546Q86UE3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 UBALD1-205ENST00000590891 2641 ntBASIC15.32■□□□□ 0.04
ZNF546Q86UE3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.32■□□□□ 0.04
ZNF546Q86UE3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF546Q86UE3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 MYC-208ENST00000641036 567 ntBASIC15.31■□□□□ 0.04
ZNF546Q86UE3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 LINC00602-201ENST00000629776 2065 ntBASIC15.31■□□□□ 0.04
ZNF546Q86UE3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF546Q86UE3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms