Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 AC020916.1-201ENST00000587762 1774 ntBASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP1BQ7LBR1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 AC018470.1-201ENST00000624790 3129 ntBASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 AC140113.3-201ENST00000605663 199 ntBASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP1BQ7LBR1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 AP000523.1-201ENST00000398242 1049 ntBASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 LINC01238-205ENST00000567549 1107 ntBASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 AC010331.1-201ENST00000611423 582 ntBASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 AL590326.2-201ENST00000625139 305 ntBASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 AL031432.5-201ENST00000641059 760 ntBASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 AL133373.2-201ENST00000623187 2828 ntBASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP1BQ7LBR1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 FER1L4-210ENST00000615531 5998 ntBASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP1BQ7LBR1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms