Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 RN7SL850P-201ENST00000579959 291 ntBASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 AC097493.4-201ENST00000641197 219 ntBASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 AL353708.3-201ENST00000610272 989 ntBASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 AL121829.2-201ENST00000620908 328 ntBASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXR1Q6PIV2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 UBALD1-205ENST00000590891 2641 ntBASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 KRT16P5-201ENST00000455284 522 ntBASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 AL445228.2-201ENST00000605589 952 ntBASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXR1Q6PIV2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 ARMC10P1-201ENST00000313754 855 ntBASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXR1Q6PIV2 AL162727.3-201ENST00000635661 2787 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms