Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 BICD1-207ENST00000551848 1962 ntBASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 GCSHP2-201ENST00000560971 527 ntBASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TTC39BQ5VTQ0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 KRT18P23-201ENST00000435622 1283 ntBASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39BQ5VTQ0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 STARP1-201ENST00000397973 869 ntBASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39BQ5VTQ0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 HCG11-201ENST00000411553 5696 ntBASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39BQ5VTQ0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms