Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 PRORSD1P-202ENST00000563365 2154 ntBASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KHDC1Q4VXA5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 TERF1P1-201ENST00000311003 1181 ntBASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 AC005521.1-201ENST00000393351 872 ntBASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 AC113347.1-201ENST00000413321 391 ntBASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 KRT8P45-201ENST00000414328 1447 ntBASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.63■□□□□ 0.57
KHDC1Q4VXA5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 HMGA1P5-201ENST00000412453 271 ntBASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 KRT18P57-201ENST00000443599 1254 ntBASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 AC073508.3-201ENST00000619697 1419 ntBASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
KHDC1Q4VXA5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 KRT8P32-201ENST00000512863 1461 ntBASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KHDC1Q4VXA5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms