Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
USH1GQ495M9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.1■□□□□ 0.97
USH1GQ495M9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.1■□□□□ 0.97
USH1GQ495M9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.1■□□□□ 0.97
USH1GQ495M9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
USH1GQ495M9 SDHAP2-201ENST00000455183 2001 ntBASIC21.1■□□□□ 0.97
USH1GQ495M9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USH1GQ495M9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
USH1GQ495M9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USH1GQ495M9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.09■□□□□ 0.97
USH1GQ495M9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.09■□□□□ 0.97
USH1GQ495M9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
USH1GQ495M9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
USH1GQ495M9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.09■□□□□ 0.97
USH1GQ495M9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.09■□□□□ 0.97
USH1GQ495M9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.09■□□□□ 0.97
USH1GQ495M9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
USH1GQ495M9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
USH1GQ495M9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
USH1GQ495M9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.09■□□□□ 0.97
USH1GQ495M9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USH1GQ495M9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USH1GQ495M9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USH1GQ495M9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.08■□□□□ 0.97
USH1GQ495M9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.08■□□□□ 0.97
USH1GQ495M9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
USH1GQ495M9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.08■□□□□ 0.97
USH1GQ495M9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USH1GQ495M9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
USH1GQ495M9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.08■□□□□ 0.97
USH1GQ495M9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USH1GQ495M9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USH1GQ495M9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
USH1GQ495M9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USH1GQ495M9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USH1GQ495M9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USH1GQ495M9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.07■□□□□ 0.96
USH1GQ495M9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USH1GQ495M9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.07■□□□□ 0.96
USH1GQ495M9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.07■□□□□ 0.96
USH1GQ495M9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.07■□□□□ 0.96
USH1GQ495M9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.07■□□□□ 0.96
USH1GQ495M9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.07■□□□□ 0.96
USH1GQ495M9 KRT126P-201ENST00000549467 1181 ntBASIC21.07■□□□□ 0.96
USH1GQ495M9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.07■□□□□ 0.96
USH1GQ495M9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.07■□□□□ 0.96
USH1GQ495M9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
USH1GQ495M9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USH1GQ495M9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.07■□□□□ 0.96
USH1GQ495M9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USH1GQ495M9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USH1GQ495M9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.06■□□□□ 0.96
USH1GQ495M9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USH1GQ495M9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USH1GQ495M9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USH1GQ495M9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USH1GQ495M9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
USH1GQ495M9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USH1GQ495M9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms