Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 AC009065.1-201ENST00000564055 1225 ntBASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 AC005336.2-201ENST00000593183 939 ntBASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.44■■□□□ 1.02
SHROOM1Q2M3G4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM1Q2M3G4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 AL121912.1-201ENST00000603683 238 ntBASIC21.42■■□□□ 1.02
SHROOM1Q2M3G4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 AC011840.4-201ENST00000578471 627 ntBASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 REXO1L6P-202ENST00000619970 1078 ntBASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM1Q2M3G4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.4■■□□□ 1.02
SHROOM1Q2M3G4 MINOS1P3-201ENST00000457048 203 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms