Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22■■□□□ 1.11
PDS5AQ29RF7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PDS5AQ29RF7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22■■□□□ 1.11
PDS5AQ29RF7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22■■□□□ 1.11
PDS5AQ29RF7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22■■□□□ 1.11
PDS5AQ29RF7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22■■□□□ 1.11
PDS5AQ29RF7 AC068472.1-201ENST00000474589 881 ntBASIC22■■□□□ 1.11
PDS5AQ29RF7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22■■□□□ 1.11
PDS5AQ29RF7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22■■□□□ 1.11
PDS5AQ29RF7 AC091304.2-201ENST00000564639 760 ntBASIC22■■□□□ 1.11
PDS5AQ29RF7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDS5AQ29RF7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 AC004870.1-201ENST00000315132 882 ntBASIC21.99■■□□□ 1.11
PDS5AQ29RF7 KRT18P65-201ENST00000439811 1286 ntBASIC21.99■■□□□ 1.11
PDS5AQ29RF7 AC099336.1-202ENST00000602961 463 ntBASIC21.99■■□□□ 1.11
PDS5AQ29RF7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDS5AQ29RF7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 BNIP3P18-201ENST00000593976 575 ntBASIC21.98■■□□□ 1.11
PDS5AQ29RF7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDS5AQ29RF7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 POM121L3P-201ENST00000419331 1163 ntBASIC21.97■■□□□ 1.11
PDS5AQ29RF7 AC026396.1-201ENST00000419388 421 ntBASIC21.97■■□□□ 1.11
PDS5AQ29RF7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 AC005336.2-201ENST00000593183 939 ntBASIC21.97■■□□□ 1.11
PDS5AQ29RF7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDS5AQ29RF7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PDS5AQ29RF7 AC073592.3-201ENST00000625118 1834 ntBASIC21.96■■□□□ 1.11
PDS5AQ29RF7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms