Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.64■□□□□ 0.73
SOX4Q06945 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX4Q06945 AL845331.1-201ENST00000424978 1190 ntBASIC19.64■□□□□ 0.73
SOX4Q06945 AC091607.1-201ENST00000490318 1060 ntBASIC19.64■□□□□ 0.73
SOX4Q06945 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
SOX4Q06945 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX4Q06945 AC124864.1-201ENST00000623408 392 ntBASIC19.64■□□□□ 0.73
SOX4Q06945 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
SOX4Q06945 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX4Q06945 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX4Q06945 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SOX4Q06945 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX4Q06945 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX4Q06945 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX4Q06945 PRELID1P1-202ENST00000567272 903 ntBASIC19.63■□□□□ 0.73
SOX4Q06945 AP005901.3-202ENST00000581653 237 ntBASIC19.63■□□□□ 0.73
SOX4Q06945 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SOX4Q06945 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SOX4Q06945 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX4Q06945 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 AC233702.3-201ENST00000578656 1387 ntBASIC19.62■□□□□ 0.73
SOX4Q06945 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX4Q06945 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX4Q06945 AC113404.2-201ENST00000507884 177 ntBASIC19.62■□□□□ 0.73
SOX4Q06945 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX4Q06945 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX4Q06945 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX4Q06945 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX4Q06945 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX4Q06945 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX4Q06945 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX4Q06945 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX4Q06945 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX4Q06945 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX4Q06945 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SOX4Q06945 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX4Q06945 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX4Q06945 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX4Q06945 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX4Q06945 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.6■□□□□ 0.73
SOX4Q06945 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms