Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RPS4XP62701 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS4XP62701 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS4XP62701 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS4XP62701 ECEL1P2-202ENST00000465689 757 ntBASIC16.63■□□□□ 0.25
RPS4XP62701 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS4XP62701 AC010203.1-204ENST00000548782 407 ntBASIC16.63■□□□□ 0.25
RPS4XP62701 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RPS4XP62701 AC020763.4-201ENST00000623414 4170 ntBASIC16.63■□□□□ 0.25
RPS4XP62701 AC036111.1-201ENST00000533973 1582 ntBASIC16.63■□□□□ 0.25
RPS4XP62701 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RPS4XP62701 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4XP62701 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS4XP62701 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4XP62701 HOXB1-202ENST00000577092 1414 ntBASIC16.62■□□□□ 0.25
RPS4XP62701 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.62■□□□□ 0.25
RPS4XP62701 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4XP62701 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4XP62701 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RPS4XP62701 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4XP62701 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS4XP62701 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RPS4XP62701 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS4XP62701 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS4XP62701 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4XP62701 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
RPS4XP62701 AC008764.6-201ENST00000595909 2069 ntBASIC16.61■□□□□ 0.25
RPS4XP62701 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
RPS4XP62701 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS4XP62701 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RPS4XP62701 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RPS4XP62701 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS4XP62701 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPS4XP62701 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.61■□□□□ 0.25
RPS4XP62701 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4XP62701 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 AC087388.1-201ENST00000571370 1112 ntBASIC16.61■□□□□ 0.25
RPS4XP62701 NTF6B-201ENST00000591913 560 ntBASIC16.61■□□□□ 0.25
RPS4XP62701 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4XP62701 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RPS4XP62701 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4XP62701 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RPS4XP62701 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS4XP62701 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS4XP62701 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4XP62701 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPS4XP62701 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4XP62701 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RPS4XP62701 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS4XP62701 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4XP62701 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms