Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SEC61A1P61619 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.12■□□□□ 0.17
SEC61A1P61619 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.12■□□□□ 0.17
SEC61A1P61619 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SEC61A1P61619 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SEC61A1P61619 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.12■□□□□ 0.17
SEC61A1P61619 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SEC61A1P61619 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SEC61A1P61619 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 MMP23A-201ENST00000234610 1017 ntBASIC16.12■□□□□ 0.17
SEC61A1P61619 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.12■□□□□ 0.17
SEC61A1P61619 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.12■□□□□ 0.17
SEC61A1P61619 LINC01023-201ENST00000606054 436 ntBASIC16.12■□□□□ 0.17
SEC61A1P61619 AC131212.4-201ENST00000623606 975 ntBASIC16.12■□□□□ 0.17
SEC61A1P61619 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SEC61A1P61619 TNRC18P3-201ENST00000441896 2691 ntBASIC16.12■□□□□ 0.17
SEC61A1P61619 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.12■□□□□ 0.17
SEC61A1P61619 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.12■□□□□ 0.17
SEC61A1P61619 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SEC61A1P61619 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.12■□□□□ 0.17
SEC61A1P61619 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.12■□□□□ 0.17
SEC61A1P61619 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61A1P61619 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.11■□□□□ 0.17
SEC61A1P61619 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
SEC61A1P61619 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.11■□□□□ 0.17
SEC61A1P61619 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.11■□□□□ 0.17
SEC61A1P61619 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.11■□□□□ 0.17
SEC61A1P61619 AC026271.3-201ENST00000571884 352 ntBASIC16.11■□□□□ 0.17
SEC61A1P61619 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.11■□□□□ 0.17
SEC61A1P61619 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SEC61A1P61619 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SEC61A1P61619 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SEC61A1P61619 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SEC61A1P61619 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.11■□□□□ 0.17
SEC61A1P61619 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61A1P61619 AC124067.4-201ENST00000519691 2379 ntBASIC16.11■□□□□ 0.17
SEC61A1P61619 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 FSCN1P1-201ENST00000568912 1481 ntBASIC16.1■□□□□ 0.17
SEC61A1P61619 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.1■□□□□ 0.17
SEC61A1P61619 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SEC61A1P61619 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.1■□□□□ 0.17
SEC61A1P61619 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.1■□□□□ 0.17
SEC61A1P61619 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
SEC61A1P61619 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SEC61A1P61619 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms