Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 AL359075.1-203ENST00000462729 1002 ntBASIC16.21■□□□□ 0.19
UBE2NP61088 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2NP61088 AC104390.1-201ENST00000555663 520 ntBASIC16.21■□□□□ 0.19
UBE2NP61088 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2NP61088 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2NP61088 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
UBE2NP61088 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2NP61088 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2NP61088 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.21■□□□□ 0.18
UBE2NP61088 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
UBE2NP61088 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
UBE2NP61088 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2NP61088 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.21■□□□□ 0.18
UBE2NP61088 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2NP61088 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
UBE2NP61088 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2NP61088 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
UBE2NP61088 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2NP61088 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2NP61088 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 SEC1P-202ENST00000473944 940 ntBASIC16.2■□□□□ 0.18
UBE2NP61088 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2NP61088 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2NP61088 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2NP61088 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2NP61088 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2NP61088 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2NP61088 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2NP61088 AC010240.3-201ENST00000607688 395 ntBASIC16.2■□□□□ 0.18
UBE2NP61088 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2NP61088 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2NP61088 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2NP61088 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2NP61088 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 STARP1-201ENST00000397973 869 ntBASIC16.19■□□□□ 0.18
UBE2NP61088 FAM8A6P-201ENST00000407496 1135 ntBASIC16.19■□□□□ 0.18
UBE2NP61088 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2NP61088 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2NP61088 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 KRT18P41-201ENST00000518924 1277 ntBASIC16.19■□□□□ 0.18
UBE2NP61088 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2NP61088 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 AC087388.1-201ENST00000571370 1112 ntBASIC16.19■□□□□ 0.18
UBE2NP61088 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
UBE2NP61088 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2NP61088 NTF6B-201ENST00000591913 560 ntBASIC16.19■□□□□ 0.18
UBE2NP61088 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.19■□□□□ 0.18
UBE2NP61088 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
UBE2NP61088 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2NP61088 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 ANO7L1-203ENST00000602586 1720 ntBASIC16.19■□□□□ 0.18
UBE2NP61088 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBE2NP61088 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
UBE2NP61088 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2NP61088 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2NP61088 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBE2NP61088 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2NP61088 AC093525.10-201ENST00000625130 1569 ntBASIC16.18■□□□□ 0.18
UBE2NP61088 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2NP61088 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2NP61088 RASA4DP-201ENST00000460726 1199 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms