Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA2D1P54289 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.51■□□□□ 0.71
CACNA2D1P54289 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA2D1P54289 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA2D1P54289 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA2D1P54289 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA2D1P54289 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA2D1P54289 ANO7L1-203ENST00000602586 1720 ntBASIC19.51■□□□□ 0.71
CACNA2D1P54289 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA2D1P54289 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 AC091076.1-201ENST00000610741 619 ntBASIC19.5■□□□□ 0.71
CACNA2D1P54289 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA2D1P54289 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA2D1P54289 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 AC093525.10-201ENST00000625130 1569 ntBASIC19.49■□□□□ 0.71
CACNA2D1P54289 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 UPK3BP1-201ENST00000428678 509 ntBASIC19.49■□□□□ 0.71
CACNA2D1P54289 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 AL031598.1-201ENST00000561511 1773 ntBASIC19.49■□□□□ 0.71
CACNA2D1P54289 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA2D1P54289 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA2D1P54289 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 AL163051.1-201ENST00000569214 1512 ntBASIC19.48■□□□□ 0.71
CACNA2D1P54289 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 AL645929.1-201ENST00000420084 975 ntBASIC19.48■□□□□ 0.71
CACNA2D1P54289 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA2D1P54289 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA2D1P54289 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA2D1P54289 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 MIR3180-4-201ENST00000582223 153 ntBASIC19.47■□□□□ 0.71
CACNA2D1P54289 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA2D1P54289 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA2D1P54289 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA2D1P54289 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA2D1P54289 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms