Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.58■□□□□ 0.56
LIMK2P53671 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.58■□□□□ 0.56
LIMK2P53671 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LIMK2P53671 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.58■□□□□ 0.56
LIMK2P53671 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LIMK2P53671 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.58■□□□□ 0.56
LIMK2P53671 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.58■□□□□ 0.56
LIMK2P53671 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.58■□□□□ 0.56
LIMK2P53671 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.58■□□□□ 0.56
LIMK2P53671 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LIMK2P53671 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.58■□□□□ 0.56
LIMK2P53671 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 AL109659.2-201ENST00000606809 1674 ntBASIC18.57■□□□□ 0.56
LIMK2P53671 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.57■□□□□ 0.56
LIMK2P53671 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LIMK2P53671 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LIMK2P53671 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
LIMK2P53671 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.57■□□□□ 0.56
LIMK2P53671 BX664615.1-201ENST00000443558 458 ntBASIC18.57■□□□□ 0.56
LIMK2P53671 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.57■□□□□ 0.56
LIMK2P53671 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.57■□□□□ 0.56
LIMK2P53671 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.57■□□□□ 0.56
LIMK2P53671 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.57■□□□□ 0.56
LIMK2P53671 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.57■□□□□ 0.56
LIMK2P53671 NTF6B-201ENST00000591913 560 ntBASIC18.57■□□□□ 0.56
LIMK2P53671 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.57■□□□□ 0.56
LIMK2P53671 AC010653.2-201ENST00000623505 997 ntBASIC18.57■□□□□ 0.56
LIMK2P53671 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LIMK2P53671 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.57■□□□□ 0.56
LIMK2P53671 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.57■□□□□ 0.56
LIMK2P53671 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LIMK2P53671 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LIMK2P53671 AC008556.1-201ENST00000610908 2040 ntBASIC18.56■□□□□ 0.56
LIMK2P53671 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 KRT18P41-201ENST00000518924 1277 ntBASIC18.56■□□□□ 0.56
LIMK2P53671 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.56■□□□□ 0.56
LIMK2P53671 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.56■□□□□ 0.56
LIMK2P53671 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LIMK2P53671 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LIMK2P53671 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.56■□□□□ 0.56
LIMK2P53671 PCDHB18P-201ENST00000524813 2368 ntBASIC18.56■□□□□ 0.56
LIMK2P53671 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
LIMK2P53671 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.56■□□□□ 0.56
LIMK2P53671 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LIMK2P53671 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.56■□□□□ 0.56
LIMK2P53671 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 MYLKP1-201ENST00000509077 1580 ntBASIC18.55■□□□□ 0.56
LIMK2P53671 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LIMK2P53671 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 AC093677.2-201ENST00000600169 1863 ntBASIC18.55■□□□□ 0.56
LIMK2P53671 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
LIMK2P53671 AC007663.1-201ENST00000438948 1240 ntBASIC18.55■□□□□ 0.56
LIMK2P53671 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms