Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AP000997.3-201ENST00000623333 2250 ntBASIC21.96■■□□□ 1.11
NEK4P51957 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK4P51957 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEK4P51957 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEK4P51957 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NEK4P51957 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NEK4P51957 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEK4P51957 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK4P51957 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
NEK4P51957 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK4P51957 CA15P1-201ENST00000481698 905 ntBASIC21.95■■□□□ 1.1
NEK4P51957 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.95■■□□□ 1.1
NEK4P51957 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.95■■□□□ 1.1
NEK4P51957 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.95■■□□□ 1.1
NEK4P51957 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.95■■□□□ 1.1
NEK4P51957 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK4P51957 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK4P51957 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NEK4P51957 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NEK4P51957 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK4P51957 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEK4P51957 AC090340.1-201ENST00000620778 4980 ntBASIC21.95■■□□□ 1.1
NEK4P51957 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
NEK4P51957 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NEK4P51957 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NEK4P51957 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NEK4P51957 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 AC134043.2-201ENST00000624206 2238 ntBASIC21.94■■□□□ 1.1
NEK4P51957 HCG11-201ENST00000411553 5696 ntBASIC21.94■■□□□ 1.1
NEK4P51957 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.94■■□□□ 1.1
NEK4P51957 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.94■■□□□ 1.1
NEK4P51957 MIR4674-201ENST00000582457 87 ntBASIC21.94■■□□□ 1.1
NEK4P51957 AC233702.5-201ENST00000584107 538 ntBASIC21.94■■□□□ 1.1
NEK4P51957 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.94■■□□□ 1.1
NEK4P51957 AL049637.2-201ENST00000641778 930 ntBASIC21.94■■□□□ 1.1
NEK4P51957 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.94■■□□□ 1.1
NEK4P51957 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.94■■□□□ 1.1
NEK4P51957 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NEK4P51957 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NEK4P51957 HTR7P1-202ENST00000624664 4411 ntBASIC21.94■■□□□ 1.1
NEK4P51957 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEK4P51957 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NEK4P51957 FZD10-202ENST00000539839 3282 ntBASIC21.93■■□□□ 1.1
NEK4P51957 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 AC012618.2-201ENST00000428058 849 ntBASIC21.93■■□□□ 1.1
NEK4P51957 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 LTB4R2-202ENST00000528054 3092 ntBASIC21.93■■□□□ 1.1
NEK4P51957 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.93■■□□□ 1.1
NEK4P51957 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.93■■□□□ 1.1
NEK4P51957 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NEK4P51957 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NEK4P51957 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
NEK4P51957 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
NEK4P51957 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NEK4P51957 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NEK4P51957 AL096828.2-201ENST00000567259 1965 ntBASIC21.92■■□□□ 1.1
NEK4P51957 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.92■■□□□ 1.1
NEK4P51957 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NEK4P51957 GMCL1P1-201ENST00000463439 1581 ntBASIC21.92■■□□□ 1.1
NEK4P51957 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NEK4P51957 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NEK4P51957 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.92■■□□□ 1.1
NEK4P51957 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEK4P51957 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms