Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SRP9P49458 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 AC004980.1-204ENST00000429707 299 ntBASIC16.36■□□□□ 0.21
SRP9P49458 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP9P49458 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP9P49458 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP9P49458 MIR4785-201ENST00000585005 73 ntBASIC16.36■□□□□ 0.21
SRP9P49458 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP9P49458 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 KRT17P2-201ENST00000300992 1314 ntBASIC16.36■□□□□ 0.21
SRP9P49458 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SRP9P49458 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SRP9P49458 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP9P49458 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP9P49458 AC104417.2-201ENST00000562989 1793 ntBASIC16.36■□□□□ 0.21
SRP9P49458 AC073592.3-201ENST00000625118 1834 ntBASIC16.35■□□□□ 0.21
SRP9P49458 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SRP9P49458 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SRP9P49458 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP9P49458 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.35■□□□□ 0.21
SRP9P49458 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP9P49458 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.35■□□□□ 0.21
SRP9P49458 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP9P49458 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SRP9P49458 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP9P49458 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SRP9P49458 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SRP9P49458 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SRP9P49458 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.34■□□□□ 0.21
SRP9P49458 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SRP9P49458 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 SNORA78-201ENST00000459373 127 ntBASIC16.34■□□□□ 0.21
SRP9P49458 NUDT16P1-203ENST00000513809 620 ntBASIC16.34■□□□□ 0.21
SRP9P49458 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SRP9P49458 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.34■□□□□ 0.21
SRP9P49458 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 AC026471.5-201ENST00000615068 467 ntBASIC16.34■□□□□ 0.21
SRP9P49458 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 TNRC18P3-201ENST00000441896 2691 ntBASIC16.34■□□□□ 0.21
SRP9P49458 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SRP9P49458 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 FSCN1P1-201ENST00000568912 1481 ntBASIC16.34■□□□□ 0.21
SRP9P49458 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.34■□□□□ 0.21
SRP9P49458 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.34■□□□□ 0.21
SRP9P49458 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.34■□□□□ 0.21
SRP9P49458 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRP9P49458 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRP9P49458 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms