Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC5P40937 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.29■□□□□ 0.84
RFC5P40937 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC5P40937 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC5P40937 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.29■□□□□ 0.84
RFC5P40937 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC5P40937 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.29■□□□□ 0.84
RFC5P40937 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC5P40937 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFC5P40937 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC5P40937 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC5P40937 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC5P40937 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC5P40937 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC5P40937 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC5P40937 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.28■□□□□ 0.84
RFC5P40937 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC5P40937 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC5P40937 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RFC5P40937 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC5P40937 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC5P40937 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.28■□□□□ 0.84
RFC5P40937 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
RFC5P40937 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
RFC5P40937 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.27■□□□□ 0.84
RFC5P40937 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RFC5P40937 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RFC5P40937 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.27■□□□□ 0.84
RFC5P40937 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 CHCHD2P8-201ENST00000429873 447 ntBASIC20.27■□□□□ 0.84
RFC5P40937 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.27■□□□□ 0.84
RFC5P40937 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.27■□□□□ 0.84
RFC5P40937 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.27■□□□□ 0.84
RFC5P40937 NPAP1P7-201ENST00000613027 823 ntBASIC20.27■□□□□ 0.84
RFC5P40937 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.27■□□□□ 0.84
RFC5P40937 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFC5P40937 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RFC5P40937 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFC5P40937 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 AL024508.2-201ENST00000607749 1894 ntBASIC20.26■□□□□ 0.83
RFC5P40937 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.26■□□□□ 0.83
RFC5P40937 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFC5P40937 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RFC5P40937 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 AC113404.2-201ENST00000507884 177 ntBASIC20.26■□□□□ 0.83
RFC5P40937 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.26■□□□□ 0.83
RFC5P40937 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.26■□□□□ 0.83
RFC5P40937 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.26■□□□□ 0.83
RFC5P40937 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFC5P40937 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.26■□□□□ 0.83
RFC5P40937 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.26■□□□□ 0.83
RFC5P40937 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC5P40937 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFC5P40937 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFC5P40937 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.25■□□□□ 0.83
RFC5P40937 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC5P40937 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RFC5P40937 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC5P40937 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RFC5P40937 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC5P40937 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC5P40937 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC5P40937 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC5P40937 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.24■□□□□ 0.83
RFC5P40937 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC5P40937 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RFC5P40937 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms