Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT2P35908 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT2P35908 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT2P35908 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT2P35908 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT2P35908 AL354751.1-201ENST00000412768 1863 ntBASIC21.11■□□□□ 0.97
KRT2P35908 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT2P35908 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 AC135776.1-201ENST00000319817 2481 ntBASIC21.11■□□□□ 0.97
KRT2P35908 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT2P35908 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT2P35908 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
KRT2P35908 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
KRT2P35908 AC092865.7-201ENST00000641832 219 ntBASIC21.11■□□□□ 0.97
KRT2P35908 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT2P35908 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT2P35908 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT2P35908 AC073508.3-201ENST00000619697 1419 ntBASIC21.11■□□□□ 0.97
KRT2P35908 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT2P35908 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
KRT2P35908 GMCL1P1-201ENST00000463439 1581 ntBASIC21.1■□□□□ 0.97
KRT2P35908 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
KRT2P35908 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.1■□□□□ 0.97
KRT2P35908 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT2P35908 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT2P35908 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT2P35908 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.1■□□□□ 0.97
KRT2P35908 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT2P35908 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.1■□□□□ 0.97
KRT2P35908 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.1■□□□□ 0.97
KRT2P35908 GCSHP2-201ENST00000560971 527 ntBASIC21.1■□□□□ 0.97
KRT2P35908 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
KRT2P35908 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT2P35908 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
KRT2P35908 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.1■□□□□ 0.97
KRT2P35908 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT2P35908 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT2P35908 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT2P35908 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT2P35908 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT2P35908 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KRT2P35908 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT2P35908 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT2P35908 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 COX11P1-201ENST00000489116 835 ntBASIC21.09■□□□□ 0.97
KRT2P35908 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 MIR3917-201ENST00000580971 93 ntBASIC21.09■□□□□ 0.97
KRT2P35908 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KRT2P35908 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 AC093677.2-201ENST00000600169 1863 ntBASIC21.09■□□□□ 0.97
KRT2P35908 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 AL390961.4-201ENST00000623958 2535 ntBASIC21.09■□□□□ 0.97
KRT2P35908 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KRT2P35908 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT2P35908 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
KRT2P35908 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT2P35908 ABALON-201ENST00000629058 1903 ntBASIC21.08■□□□□ 0.97
KRT2P35908 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT2P35908 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 KRT18P57-201ENST00000443599 1254 ntBASIC21.08■□□□□ 0.97
KRT2P35908 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT2P35908 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT2P35908 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT2P35908 AC140113.3-201ENST00000605663 199 ntBASIC21.08■□□□□ 0.97
KRT2P35908 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT2P35908 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
KRT2P35908 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.08■□□□□ 0.96
KRT2P35908 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT2P35908 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.08■□□□□ 0.96
KRT2P35908 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.07■□□□□ 0.96
KRT2P35908 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms