Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SOX6P35712 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX6P35712 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SOX6P35712 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX6P35712 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX6P35712 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SOX6P35712 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SOX6P35712 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.53■□□□□ 0.24
SOX6P35712 AC011767.1-201ENST00000617410 1153 ntBASIC16.53■□□□□ 0.24
SOX6P35712 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.53■□□□□ 0.24
SOX6P35712 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.53■□□□□ 0.24
SOX6P35712 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.53■□□□□ 0.24
SOX6P35712 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SOX6P35712 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.52■□□□□ 0.24
SOX6P35712 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SOX6P35712 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SOX6P35712 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.52■□□□□ 0.24
SOX6P35712 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SOX6P35712 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.52■□□□□ 0.24
SOX6P35712 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 AC004911.1-201ENST00000416316 871 ntBASIC16.52■□□□□ 0.24
SOX6P35712 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SOX6P35712 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.52■□□□□ 0.24
SOX6P35712 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.52■□□□□ 0.24
SOX6P35712 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SOX6P35712 AC016405.3-201ENST00000607710 860 ntBASIC16.52■□□□□ 0.24
SOX6P35712 AC010536.3-201ENST00000620306 533 ntBASIC16.52■□□□□ 0.24
SOX6P35712 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX6P35712 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX6P35712 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX6P35712 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX6P35712 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SOX6P35712 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SOX6P35712 AC011676.5-201ENST00000624864 2660 ntBASIC16.52■□□□□ 0.23
SOX6P35712 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.51■□□□□ 0.23
SOX6P35712 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 AL118508.1-201ENST00000613502 2345 ntBASIC16.51■□□□□ 0.23
SOX6P35712 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
SOX6P35712 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.51■□□□□ 0.23
SOX6P35712 TERF1P5-201ENST00000477545 1207 ntBASIC16.51■□□□□ 0.23
SOX6P35712 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.51■□□□□ 0.23
SOX6P35712 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SOX6P35712 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 AC092437.1-201ENST00000624794 1048 ntBASIC16.51■□□□□ 0.23
SOX6P35712 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SOX6P35712 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.51■□□□□ 0.23
SOX6P35712 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 AL023806.1-201ENST00000603994 1649 ntBASIC16.51■□□□□ 0.23
SOX6P35712 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SOX6P35712 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SOX6P35712 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms