Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN1P35523 UNC93B4-201ENST00000505679 747 ntBASIC20.96■□□□□ 0.95
CLCN1P35523 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.96■□□□□ 0.95
CLCN1P35523 AC008687.6-201ENST00000596318 630 ntBASIC20.96■□□□□ 0.95
CLCN1P35523 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.96■□□□□ 0.95
CLCN1P35523 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN1P35523 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLCN1P35523 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLCN1P35523 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN1P35523 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLCN1P35523 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.96■□□□□ 0.95
CLCN1P35523 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLCN1P35523 UNC93B5-201ENST00000530315 699 ntBASIC20.95■□□□□ 0.94
CLCN1P35523 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.95■□□□□ 0.94
CLCN1P35523 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCN1P35523 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCN1P35523 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLCN1P35523 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN1P35523 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCN1P35523 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCN1P35523 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.94■□□□□ 0.94
CLCN1P35523 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.94■□□□□ 0.94
CLCN1P35523 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.94■□□□□ 0.94
CLCN1P35523 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CLCN1P35523 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN1P35523 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCN1P35523 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLCN1P35523 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CLCN1P35523 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.93■□□□□ 0.94
CLCN1P35523 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 AC008403.3-201ENST00000598924 454 ntBASIC20.93■□□□□ 0.94
CLCN1P35523 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 PCDHA1-201ENST00000378133 2726 ntBASIC20.93■□□□□ 0.94
CLCN1P35523 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN1P35523 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN1P35523 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CLCN1P35523 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CLCN1P35523 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN1P35523 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLCN1P35523 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms