Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THBS4P35443 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.21■□□□□ 0.19
THBS4P35443 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.21■□□□□ 0.19
THBS4P35443 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
THBS4P35443 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
THBS4P35443 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS4P35443 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THBS4P35443 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.21■□□□□ 0.19
THBS4P35443 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS4P35443 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS4P35443 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.21■□□□□ 0.19
THBS4P35443 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS4P35443 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
THBS4P35443 AC126763.1-201ENST00000552015 2118 ntBASIC16.21■□□□□ 0.18
THBS4P35443 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
THBS4P35443 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
THBS4P35443 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS4P35443 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS4P35443 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS4P35443 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS4P35443 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 AL023284.2-201ENST00000405850 579 ntBASIC16.2■□□□□ 0.18
THBS4P35443 AC117947.1-201ENST00000427448 529 ntBASIC16.2■□□□□ 0.18
THBS4P35443 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 COX11P1-201ENST00000489116 835 ntBASIC16.2■□□□□ 0.18
THBS4P35443 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.2■□□□□ 0.18
THBS4P35443 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS4P35443 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.2■□□□□ 0.18
THBS4P35443 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.2■□□□□ 0.18
THBS4P35443 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
THBS4P35443 AL162741.1-201ENST00000565563 1558 ntBASIC16.2■□□□□ 0.18
THBS4P35443 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
THBS4P35443 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS4P35443 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS4P35443 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
THBS4P35443 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.19■□□□□ 0.18
THBS4P35443 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
THBS4P35443 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
THBS4P35443 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.19■□□□□ 0.18
THBS4P35443 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.19■□□□□ 0.18
THBS4P35443 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
THBS4P35443 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.19■□□□□ 0.18
THBS4P35443 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
THBS4P35443 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
THBS4P35443 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.19■□□□□ 0.18
THBS4P35443 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.19■□□□□ 0.18
THBS4P35443 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.19■□□□□ 0.18
THBS4P35443 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.19■□□□□ 0.18
THBS4P35443 AC140113.3-201ENST00000605663 199 ntBASIC16.19■□□□□ 0.18
THBS4P35443 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS4P35443 CR769767.2-201ENST00000622735 460 ntBASIC16.19■□□□□ 0.18
THBS4P35443 AL590326.2-201ENST00000625139 305 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms