Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.05■□□□□ 0.8
RFX1P22670 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.05■□□□□ 0.8
RFX1P22670 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.05■□□□□ 0.8
RFX1P22670 AL138966.2-201ENST00000621997 464 ntBASIC20.05■□□□□ 0.8
RFX1P22670 AC141257.4-201ENST00000634557 245 ntBASIC20.05■□□□□ 0.8
RFX1P22670 AC136944.6-201ENST00000634818 245 ntBASIC20.05■□□□□ 0.8
RFX1P22670 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX1P22670 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX1P22670 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFX1P22670 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RFX1P22670 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
RFX1P22670 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 DUSP5P1-201ENST00000441325 1139 ntBASIC20.04■□□□□ 0.8
RFX1P22670 AL359075.1-203ENST00000462729 1002 ntBASIC20.04■□□□□ 0.8
RFX1P22670 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFX1P22670 AC034236.2-201ENST00000606662 1610 ntBASIC20.04■□□□□ 0.8
RFX1P22670 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX1P22670 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFX1P22670 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX1P22670 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX1P22670 AL671277.2-201ENST00000458060 996 ntBASIC20.03■□□□□ 0.8
RFX1P22670 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.03■□□□□ 0.8
RFX1P22670 AC010653.2-201ENST00000623505 997 ntBASIC20.03■□□□□ 0.8
RFX1P22670 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX1P22670 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.03■□□□□ 0.8
RFX1P22670 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RFX1P22670 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX1P22670 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX1P22670 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 ABALON-201ENST00000629058 1903 ntBASIC20.02■□□□□ 0.8
RFX1P22670 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX1P22670 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RFX1P22670 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX1P22670 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX1P22670 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.02■□□□□ 0.8
RFX1P22670 MIR3180-5-201ENST00000583743 153 ntBASIC20.02■□□□□ 0.8
RFX1P22670 AC069148.1-201ENST00000608741 768 ntBASIC20.02■□□□□ 0.8
RFX1P22670 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.02■□□□□ 0.8
RFX1P22670 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 AC011558.1-201ENST00000623459 338 ntBASIC20.02■□□□□ 0.8
RFX1P22670 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms