Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 MTDHP3-201ENST00000594186 672 ntBASIC18.17■□□□□ 0.5
BCKDHBP21953 AP001269.4-201ENST00000609611 512 ntBASIC18.17■□□□□ 0.5
BCKDHBP21953 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BCKDHBP21953 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BCKDHBP21953 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BCKDHBP21953 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCKDHBP21953 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BCKDHBP21953 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BCKDHBP21953 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.17■□□□□ 0.5
BCKDHBP21953 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
BCKDHBP21953 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BCKDHBP21953 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BCKDHBP21953 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.16■□□□□ 0.5
BCKDHBP21953 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.16■□□□□ 0.5
BCKDHBP21953 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.16■□□□□ 0.5
BCKDHBP21953 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.16■□□□□ 0.5
BCKDHBP21953 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.16■□□□□ 0.5
BCKDHBP21953 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.16■□□□□ 0.5
BCKDHBP21953 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BCKDHBP21953 AC116407.3-201ENST00000623905 1129 ntBASIC18.16■□□□□ 0.5
BCKDHBP21953 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.16■□□□□ 0.5
BCKDHBP21953 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
BCKDHBP21953 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.16■□□□□ 0.5
BCKDHBP21953 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BCKDHBP21953 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BCKDHBP21953 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BCKDHBP21953 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
BCKDHBP21953 AL158211.5-201ENST00000623583 2518 ntBASIC18.15■□□□□ 0.5
BCKDHBP21953 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.15■□□□□ 0.5
BCKDHBP21953 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BCKDHBP21953 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BCKDHBP21953 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.15■□□□□ 0.5
BCKDHBP21953 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.15■□□□□ 0.5
BCKDHBP21953 SCARNA2-201ENST00000458748 420 ntBASIC18.15■□□□□ 0.5
BCKDHBP21953 KRT18P41-201ENST00000518924 1277 ntBASIC18.15■□□□□ 0.5
BCKDHBP21953 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.15■□□□□ 0.5
BCKDHBP21953 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.15■□□□□ 0.5
BCKDHBP21953 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.15■□□□□ 0.5
BCKDHBP21953 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.15■□□□□ 0.5
BCKDHBP21953 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
BCKDHBP21953 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.15■□□□□ 0.5
BCKDHBP21953 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BCKDHBP21953 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.15■□□□□ 0.5
BCKDHBP21953 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.15■□□□□ 0.5
BCKDHBP21953 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BCKDHBP21953 AC112777.1-201ENST00000540175 1423 ntBASIC18.15■□□□□ 0.5
BCKDHBP21953 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.14■□□□□ 0.5
BCKDHBP21953 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BCKDHBP21953 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.14■□□□□ 0.5
BCKDHBP21953 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BCKDHBP21953 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BCKDHBP21953 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
BCKDHBP21953 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
BCKDHBP21953 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.14■□□□□ 0.49
BCKDHBP21953 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 ZNF259P1-201ENST00000407656 1365 ntBASIC18.14■□□□□ 0.49
BCKDHBP21953 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHBP21953 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
BCKDHBP21953 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.14■□□□□ 0.49
BCKDHBP21953 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
BCKDHBP21953 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms