Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PF4V1P10720 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PF4V1P10720 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PF4V1P10720 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.61□□□□□ -0.07
PF4V1P10720 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.61□□□□□ -0.07
PF4V1P10720 AC112907.2-201ENST00000448639 330 ntBASIC14.61□□□□□ -0.07
PF4V1P10720 KRT18P56-201ENST00000507275 550 ntBASIC14.61□□□□□ -0.07
PF4V1P10720 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.61□□□□□ -0.07
PF4V1P10720 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.61□□□□□ -0.07
PF4V1P10720 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.61□□□□□ -0.07
PF4V1P10720 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.61□□□□□ -0.07
PF4V1P10720 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PF4V1P10720 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.61□□□□□ -0.07
PF4V1P10720 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 HEIH-201ENST00000623091 1652 ntBASIC14.61□□□□□ -0.07
PF4V1P10720 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.61□□□□□ -0.07
PF4V1P10720 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PF4V1P10720 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PF4V1P10720 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.6□□□□□ -0.07
PF4V1P10720 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.6□□□□□ -0.07
PF4V1P10720 AC034232.1-201ENST00000506026 1064 ntBASIC14.6□□□□□ -0.07
PF4V1P10720 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.6□□□□□ -0.07
PF4V1P10720 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 AC069148.1-201ENST00000608741 768 ntBASIC14.6□□□□□ -0.07
PF4V1P10720 AC068587.9-201ENST00000641814 219 ntBASIC14.6□□□□□ -0.07
PF4V1P10720 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.6□□□□□ -0.07
PF4V1P10720 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.6□□□□□ -0.07
PF4V1P10720 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PF4V1P10720 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PF4V1P10720 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 AC006333.2-201ENST00000607957 2099 ntBASIC14.59□□□□□ -0.07
PF4V1P10720 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.59□□□□□ -0.07
PF4V1P10720 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.59□□□□□ -0.07
PF4V1P10720 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.59□□□□□ -0.07
PF4V1P10720 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PF4V1P10720 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.59□□□□□ -0.07
PF4V1P10720 FAM86EP-206ENST00000510506 987 ntBASIC14.59□□□□□ -0.07
PF4V1P10720 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.59□□□□□ -0.07
PF4V1P10720 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.59□□□□□ -0.07
PF4V1P10720 CROCCP1-201ENST00000426910 5675 ntBASIC14.59□□□□□ -0.07
PF4V1P10720 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PF4V1P10720 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
PF4V1P10720 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
PF4V1P10720 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PF4V1P10720 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PF4V1P10720 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PF4V1P10720 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 AC087289.5-201ENST00000586076 3175 ntBASIC14.58□□□□□ -0.08
PF4V1P10720 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 AP000974.1-201ENST00000623909 2387 ntBASIC14.58□□□□□ -0.08
PF4V1P10720 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms