Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PTPRFP10586 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTPRFP10586 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PTPRFP10586 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPRFP10586 RCN1P2-201ENST00000398357 915 ntBASIC21.08■□□□□ 0.97
PTPRFP10586 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.08■□□□□ 0.97
PTPRFP10586 ABCD1P5-201ENST00000445663 754 ntBASIC21.08■□□□□ 0.97
PTPRFP10586 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPRFP10586 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.08■□□□□ 0.97
PTPRFP10586 AL139288.1-201ENST00000623748 933 ntBASIC21.08■□□□□ 0.97
PTPRFP10586 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PTPRFP10586 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPRFP10586 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPRFP10586 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPRFP10586 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PTPRFP10586 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.08■□□□□ 0.97
PTPRFP10586 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PTPRFP10586 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTPRFP10586 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PTPRFP10586 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTPRFP10586 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTPRFP10586 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.08■□□□□ 0.96
PTPRFP10586 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTPRFP10586 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.08■□□□□ 0.96
PTPRFP10586 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.08■□□□□ 0.96
PTPRFP10586 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PTPRFP10586 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPRFP10586 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PTPRFP10586 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 BX842568.4-201ENST00000421222 227 ntBASIC21.07■□□□□ 0.96
PTPRFP10586 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.07■□□□□ 0.96
PTPRFP10586 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.07■□□□□ 0.96
PTPRFP10586 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.07■□□□□ 0.96
PTPRFP10586 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPRFP10586 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPRFP10586 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.07■□□□□ 0.96
PTPRFP10586 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTPRFP10586 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 AL499627.1-201ENST00000569373 2188 ntBASIC21.06■□□□□ 0.96
PTPRFP10586 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPRFP10586 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPRFP10586 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PTPRFP10586 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPRFP10586 AC098831.1-202ENST00000438821 336 ntBASIC21.06■□□□□ 0.96
PTPRFP10586 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPRFP10586 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPRFP10586 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTPRFP10586 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTPRFP10586 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPRFP10586 AC011467.2-201ENST00000598425 242 ntBASIC21.06■□□□□ 0.96
PTPRFP10586 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPRFP10586 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PTPRFP10586 AC008735.5-201ENST00000623544 497 ntBASIC21.06■□□□□ 0.96
PTPRFP10586 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPRFP10586 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPRFP10586 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPRFP10586 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTPRFP10586 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.05■□□□□ 0.96
PTPRFP10586 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 AC009154.2-201ENST00000621177 724 ntBASIC21.05■□□□□ 0.96
PTPRFP10586 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPRFP10586 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPRFP10586 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPRFP10586 RPS2P1-201ENST00000434010 821 ntBASIC21.04■□□□□ 0.96
PTPRFP10586 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPRFP10586 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPRFP10586 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.04■□□□□ 0.96
PTPRFP10586 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPRFP10586 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms