Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 HEIH-201ENST00000623091 1652 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AIRN-201ENST00000601203 4374 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 AP000593.1-201ENST00000393668 712 ntBASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 AC111152.3-201ENST00000569699 673 ntBASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 GPR32P1-201ENST00000601788 811 ntBASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40ALP0C0E4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 KRT89P-201ENST00000620027 1478 ntBASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40ALP0C0E4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 AL032819.2-201ENST00000624543 2162 ntBASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40ALP0C0E4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms