Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MMP3P08254 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP3P08254 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP3P08254 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP3P08254 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.35■□□□□ 0.85
MMP3P08254 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
MMP3P08254 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.35■□□□□ 0.85
MMP3P08254 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.35■□□□□ 0.85
MMP3P08254 MIR5100-201ENST00000579544 119 ntBASIC20.35■□□□□ 0.85
MMP3P08254 AC005336.2-201ENST00000593183 939 ntBASIC20.35■□□□□ 0.85
MMP3P08254 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MMP3P08254 AL591684.3-201ENST00000605187 298 ntBASIC20.35■□□□□ 0.85
MMP3P08254 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP3P08254 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MMP3P08254 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP3P08254 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MMP3P08254 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MMP3P08254 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MMP3P08254 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP3P08254 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MMP3P08254 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP3P08254 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP3P08254 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
MMP3P08254 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP3P08254 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.34■□□□□ 0.85
MMP3P08254 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP3P08254 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP3P08254 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP3P08254 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP3P08254 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP3P08254 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP3P08254 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MMP3P08254 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MMP3P08254 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP3P08254 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP3P08254 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP3P08254 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.33■□□□□ 0.85
MMP3P08254 AC068472.1-201ENST00000474589 881 ntBASIC20.33■□□□□ 0.85
MMP3P08254 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.33■□□□□ 0.85
MMP3P08254 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP3P08254 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP3P08254 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP3P08254 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP3P08254 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
MMP3P08254 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP3P08254 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.84
MMP3P08254 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP3P08254 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.33■□□□□ 0.84
MMP3P08254 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.33■□□□□ 0.84
MMP3P08254 AC116562.4-201ENST00000641316 2276 ntBASIC20.33■□□□□ 0.84
MMP3P08254 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP3P08254 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.33■□□□□ 0.84
MMP3P08254 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MMP3P08254 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP3P08254 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
MMP3P08254 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP3P08254 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MMP3P08254 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP3P08254 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MMP3P08254 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
MMP3P08254 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP3P08254 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP3P08254 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP3P08254 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MMP3P08254 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MMP3P08254 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
MMP3P08254 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP3P08254 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP3P08254 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms