Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL390955.1-201ENST00000428694 934 ntBASIC16.96■□□□□ 0.31
THBS1P07996 SLC25A6P5-201ENST00000435663 894 ntBASIC16.96■□□□□ 0.31
THBS1P07996 AC007663.1-201ENST00000438948 1240 ntBASIC16.96■□□□□ 0.31
THBS1P07996 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.96■□□□□ 0.31
THBS1P07996 MIR3180-4-201ENST00000582223 153 ntBASIC16.96■□□□□ 0.31
THBS1P07996 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
THBS1P07996 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.96■□□□□ 0.31
THBS1P07996 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.96■□□□□ 0.31
THBS1P07996 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
THBS1P07996 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.96■□□□□ 0.3
THBS1P07996 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
THBS1P07996 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
THBS1P07996 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
THBS1P07996 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.96■□□□□ 0.3
THBS1P07996 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
THBS1P07996 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
THBS1P07996 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
THBS1P07996 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
THBS1P07996 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
THBS1P07996 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
THBS1P07996 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
THBS1P07996 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.95■□□□□ 0.3
THBS1P07996 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.95■□□□□ 0.3
THBS1P07996 EGLN1P1-201ENST00000531623 762 ntBASIC16.95■□□□□ 0.3
THBS1P07996 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.95■□□□□ 0.3
THBS1P07996 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.95■□□□□ 0.3
THBS1P07996 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 AC010331.1-201ENST00000611423 582 ntBASIC16.95■□□□□ 0.3
THBS1P07996 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.95■□□□□ 0.3
THBS1P07996 SDHAP2-201ENST00000455183 2001 ntBASIC16.95■□□□□ 0.3
THBS1P07996 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
THBS1P07996 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS1P07996 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.95■□□□□ 0.3
THBS1P07996 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
THBS1P07996 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.95■□□□□ 0.3
THBS1P07996 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
THBS1P07996 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
THBS1P07996 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
THBS1P07996 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
THBS1P07996 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.94■□□□□ 0.3
THBS1P07996 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 AC138028.4-201ENST00000564984 1845 ntBASIC16.94■□□□□ 0.3
THBS1P07996 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.94■□□□□ 0.3
THBS1P07996 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
THBS1P07996 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.94■□□□□ 0.3
THBS1P07996 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
THBS1P07996 AC133561.5-201ENST00000635547 218 ntBASIC16.94■□□□□ 0.3
THBS1P07996 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
THBS1P07996 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.94■□□□□ 0.3
THBS1P07996 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS1P07996 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
THBS1P07996 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
THBS1P07996 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.93■□□□□ 0.3
THBS1P07996 FLJ13224-201ENST00000313737 1514 ntBASIC16.93■□□□□ 0.3
THBS1P07996 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
THBS1P07996 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.93■□□□□ 0.3
THBS1P07996 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.93■□□□□ 0.3
THBS1P07996 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.93■□□□□ 0.3
THBS1P07996 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms