Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.56■□□□□ 0.56
RETP07949 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.56■□□□□ 0.56
RETP07949 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RETP07949 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.55■□□□□ 0.56
RETP07949 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RETP07949 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.55■□□□□ 0.56
RETP07949 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RETP07949 BX842568.4-201ENST00000421222 227 ntBASIC18.55■□□□□ 0.56
RETP07949 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.55■□□□□ 0.56
RETP07949 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.55■□□□□ 0.56
RETP07949 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.55■□□□□ 0.56
RETP07949 AP003733.1-201ENST00000491725 852 ntBASIC18.55■□□□□ 0.56
RETP07949 AC093909.1-201ENST00000504731 1122 ntBASIC18.55■□□□□ 0.56
RETP07949 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.55■□□□□ 0.56
RETP07949 AL390719.2-201ENST00000606993 987 ntBASIC18.55■□□□□ 0.56
RETP07949 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.55■□□□□ 0.56
RETP07949 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RETP07949 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RETP07949 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.55■□□□□ 0.56
RETP07949 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RETP07949 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
RETP07949 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.54■□□□□ 0.56
RETP07949 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RETP07949 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RETP07949 AL031284.1-201ENST00000419297 478 ntBASIC18.54■□□□□ 0.56
RETP07949 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.54■□□□□ 0.56
RETP07949 FAM197Y8-203ENST00000450145 560 ntBASIC18.54■□□□□ 0.56
RETP07949 AC106730.1-201ENST00000566722 1090 ntBASIC18.54■□□□□ 0.56
RETP07949 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.54■□□□□ 0.56
RETP07949 TP73-AS1-207ENST00000624167 988 ntBASIC18.54■□□□□ 0.56
RETP07949 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RETP07949 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RETP07949 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RETP07949 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.53■□□□□ 0.56
RETP07949 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RETP07949 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.53■□□□□ 0.56
RETP07949 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.53■□□□□ 0.56
RETP07949 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 POLD2P1-201ENST00000511220 997 ntBASIC18.53■□□□□ 0.56
RETP07949 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.53■□□□□ 0.56
RETP07949 TERC-201ENST00000602385 541 ntBASIC18.53■□□□□ 0.56
RETP07949 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RETP07949 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RETP07949 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.53■□□□□ 0.56
RETP07949 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.53■□□□□ 0.56
RETP07949 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.53■□□□□ 0.56
RETP07949 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.53■□□□□ 0.56
RETP07949 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RETP07949 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RETP07949 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RETP07949 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
RETP07949 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RETP07949 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.52■□□□□ 0.56
RETP07949 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RETP07949 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms