Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN1P07384 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN1P07384 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 AC092338.2-201ENST00000568827 1415 ntBASIC18.15■□□□□ 0.5
CAPN1P07384 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN1P07384 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CAPN1P07384 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.14■□□□□ 0.5
CAPN1P07384 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CAPN1P07384 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN1P07384 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN1P07384 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CAPN1P07384 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN1P07384 LIN28AP1-201ENST00000429574 405 ntBASIC18.14■□□□□ 0.49
CAPN1P07384 AC007663.1-201ENST00000438948 1240 ntBASIC18.14■□□□□ 0.49
CAPN1P07384 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 CKBP1-201ENST00000565489 1086 ntBASIC18.14■□□□□ 0.49
CAPN1P07384 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN1P07384 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN1P07384 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CAPN1P07384 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN1P07384 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN1P07384 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN1P07384 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN1P07384 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN1P07384 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN1P07384 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN1P07384 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 HMGA1P5-201ENST00000412453 271 ntBASIC18.13■□□□□ 0.49
CAPN1P07384 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN1P07384 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN1P07384 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 AL357033.4-201ENST00000617703 1807 ntBASIC18.13■□□□□ 0.49
CAPN1P07384 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN1P07384 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN1P07384 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
CAPN1P07384 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN1P07384 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.12■□□□□ 0.49
CAPN1P07384 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CAPN1P07384 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CAPN1P07384 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CAPN1P07384 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 CCR12P-201ENST00000446203 998 ntBASIC18.12■□□□□ 0.49
CAPN1P07384 ATP5G1P1-201ENST00000448724 379 ntBASIC18.12■□□□□ 0.49
CAPN1P07384 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
CAPN1P07384 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN1P07384 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN1P07384 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CAPN1P07384 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.12■□□□□ 0.49
CAPN1P07384 AL138966.2-201ENST00000621997 464 ntBASIC18.12■□□□□ 0.49
CAPN1P07384 AC010653.2-201ENST00000623505 997 ntBASIC18.12■□□□□ 0.49
CAPN1P07384 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN1P07384 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms