Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.43■□□□□ 0.7
RB1P06400 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.43■□□□□ 0.7
RB1P06400 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RB1P06400 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.43■□□□□ 0.7
RB1P06400 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
RB1P06400 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.43■□□□□ 0.7
RB1P06400 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.43■□□□□ 0.7
RB1P06400 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 AC021087.4-201ENST00000563761 564 ntBASIC19.43■□□□□ 0.7
RB1P06400 AC011467.2-201ENST00000598425 242 ntBASIC19.43■□□□□ 0.7
RB1P06400 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.43■□□□□ 0.7
RB1P06400 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.43■□□□□ 0.7
RB1P06400 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.43■□□□□ 0.7
RB1P06400 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.43■□□□□ 0.7
RB1P06400 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RB1P06400 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 AL138831.2-201ENST00000606564 490 ntBASIC19.42■□□□□ 0.7
RB1P06400 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.42■□□□□ 0.7
RB1P06400 AL691403.2-201ENST00000618460 490 ntBASIC19.42■□□□□ 0.7
RB1P06400 AC009154.2-201ENST00000621177 724 ntBASIC19.42■□□□□ 0.7
RB1P06400 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.42■□□□□ 0.7
RB1P06400 AC104109.2-201ENST00000602919 1418 ntBASIC19.42■□□□□ 0.7
RB1P06400 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RB1P06400 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RB1P06400 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RB1P06400 HLA-J-201ENST00000462773 1622 ntBASIC19.41■□□□□ 0.7
RB1P06400 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.41■□□□□ 0.7
RB1P06400 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 ABCD1P5-201ENST00000445663 754 ntBASIC19.41■□□□□ 0.7
RB1P06400 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.41■□□□□ 0.7
RB1P06400 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
RB1P06400 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.41■□□□□ 0.7
RB1P06400 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 AC009102.3-201ENST00000623118 1491 ntBASIC19.41■□□□□ 0.7
RB1P06400 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
RB1P06400 MTMR9LP-203ENST00000426597 1545 ntBASIC19.41■□□□□ 0.7
RB1P06400 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RB1P06400 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RB1P06400 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RB1P06400 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RB1P06400 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RB1P06400 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RB1P06400 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RB1P06400 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.4■□□□□ 0.7
RB1P06400 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RB1P06400 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.4■□□□□ 0.7
RB1P06400 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.4■□□□□ 0.7
RB1P06400 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RB1P06400 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms