Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQB2P05538 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 AC140113.3-201ENST00000605663 199 ntBASIC18.68■□□□□ 0.58
HLA-DQB2P05538 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 AL162741.1-201ENST00000565563 1558 ntBASIC18.68■□□□□ 0.58
HLA-DQB2P05538 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB2P05538 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AL354751.1-201ENST00000412768 1863 ntBASIC18.67■□□□□ 0.58
HLA-DQB2P05538 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AC009065.1-201ENST00000564055 1225 ntBASIC18.67■□□□□ 0.58
HLA-DQB2P05538 RN7SL850P-201ENST00000579959 291 ntBASIC18.67■□□□□ 0.58
HLA-DQB2P05538 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DQB2P05538 AC093677.2-201ENST00000600169 1863 ntBASIC18.67■□□□□ 0.58
HLA-DQB2P05538 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 GMCL1P1-201ENST00000463439 1581 ntBASIC18.66■□□□□ 0.58
HLA-DQB2P05538 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB2P05538 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms