Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.32■□□□□ 0.84
CD4P01730 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.32■□□□□ 0.84
CD4P01730 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.32■□□□□ 0.84
CD4P01730 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CD4P01730 AC243591.1-201ENST00000452967 1364 ntBASIC20.32■□□□□ 0.84
CD4P01730 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.32■□□□□ 0.84
CD4P01730 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.32■□□□□ 0.84
CD4P01730 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CD4P01730 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD4P01730 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CD4P01730 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CD4P01730 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.31■□□□□ 0.84
CD4P01730 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.31■□□□□ 0.84
CD4P01730 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.31■□□□□ 0.84
CD4P01730 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.31■□□□□ 0.84
CD4P01730 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.31■□□□□ 0.84
CD4P01730 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.31■□□□□ 0.84
CD4P01730 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD4P01730 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.3■□□□□ 0.84
CD4P01730 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CD4P01730 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CD4P01730 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.3■□□□□ 0.84
CD4P01730 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 AC018712.1-201ENST00000455767 687 ntBASIC20.3■□□□□ 0.84
CD4P01730 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.3■□□□□ 0.84
CD4P01730 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.3■□□□□ 0.84
CD4P01730 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.3■□□□□ 0.84
CD4P01730 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD4P01730 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.29■□□□□ 0.84
CD4P01730 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.29■□□□□ 0.84
CD4P01730 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 AC005332.7-201ENST00000614046 2005 ntBASIC20.29■□□□□ 0.84
CD4P01730 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.29■□□□□ 0.84
CD4P01730 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CD4P01730 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.29■□□□□ 0.84
CD4P01730 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.29■□□□□ 0.84
CD4P01730 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.29■□□□□ 0.84
CD4P01730 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 AC114341.1-201ENST00000618070 349 ntBASIC20.29■□□□□ 0.84
CD4P01730 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CD4P01730 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.29■□□□□ 0.84
CD4P01730 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.29■□□□□ 0.84
CD4P01730 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD4P01730 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.28■□□□□ 0.84
CD4P01730 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CD4P01730 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD4P01730 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.28■□□□□ 0.84
CD4P01730 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CD4P01730 AC132008.2-207ENST00000454517 770 ntBASIC20.28■□□□□ 0.84
CD4P01730 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.28■□□□□ 0.84
CD4P01730 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.28■□□□□ 0.84
CD4P01730 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CD4P01730 AC008608.2-201ENST00000606089 416 ntBASIC20.28■□□□□ 0.84
CD4P01730 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms